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bhklab
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PharmacoDI_snakemake_pipeline
A Snakemake pipeline to automate the scripts for creating all PharmacoDB database tables and allow easy deployment on a range of platforms.
MIT License
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UHNBreast Hill Slope values are NULL in the current PDB database
#11
p-smirnov
opened
2 years ago
4
Rerun PharmacoDI to update PharmacoDB
#10
ChristopherEeles
opened
2 years ago
0
Concatenate duplicated reactome_ids with '///'
#9
ChristopherEeles
opened
3 years ago
1
Three drugs from NCI60 failed to map to the drugs_with_ids.csv file
#8
ChristopherEeles
opened
3 years ago
2
TODO: Remove or formalize annotation update work arounds
#7
ChristopherEeles
opened
3 years ago
0
`get_chembl_compound_targets` rule runs as part of `all` rule
#6
ChristopherEeles
opened
3 years ago
0
Reintegrate schema_change to main
#4
ChristopherEeles
closed
3 years ago
0
Add ChEMBL ids for drug annotations
#5
sisiranair
closed
3 years ago
1
Update cell line table to include the unique ids.
#3
gangeshberi
closed
3 years ago
0
SQLAlchemy dropping all tables fails with foreign key error.
#2
ChristopherEeles
closed
3 years ago
0
SQLAlchemy DB writes fail with new tables
#1
ChristopherEeles
closed
3 years ago
0