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bhmm / legacy-bhmm-force-spectroscopy-manuscript

Bayesian hidden Markov models for analysis of single-molecule trajectory data
GNU Lesser General Public License v3.0
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Update devtools/conda-recipe for new dependencies #19

Open jchodera opened 9 years ago

jchodera commented 9 years ago

It appears that setup.py has been updated with new dependencies that are not necessarily reflected in devtools/conda-recipe, which means that the travis-built bhmm-dev conda development package may not work.

I'm working on an updated main conda recipe here: https://github.com/omnia-md/conda-recipes/pull/188

I was trying to test this before back-porting my changes to devtools/conda-recipe, but ran into the imports issue when testing described in #18.

franknoe commented 9 years ago

Am 05/05/15 um 03:52 schrieb John Chodera:

It appears that |setup.py| https://github.com/bhmm/bhmm/blob/master/setup.py has been updated with new dependencies that are not necessarily reflected in |devtools/conda-recipe| https://github.com/bhmm/bhmm/tree/master/devtools/conda-recipe, which means that the travis-built |bhmm-dev| conda development package may not work.

Yes, I have not updated the conda recipe. Let me talk to Martin today how to do this, I haven't done this yet at all.

I'm working on an updated main conda recipe here: omnia-md/conda-recipes#188 https://github.com/omnia-md/conda-recipes/pull/188

I was trying to test this before back-porting my changes to |devtools/conda-recipe| https://github.com/bhmm/bhmm/tree/master/devtools/conda-recipe, but ran into the imports issue when testing described in #18 https://github.com/bhmm/bhmm/issues/18.

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