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bhmm / legacy-bhmm-force-spectroscopy-manuscript

Bayesian hidden Markov models for analysis of single-molecule trajectory data
GNU Lesser General Public License v3.0
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Get bhmm ready for pypi (deployment) #45

Closed marscher closed 9 years ago

marscher commented 9 years ago

This change to travis enables to automatically push a source archive to pypi, once a project owner pushes a new tag (release) to git.

note: this is not functional, since the security tokens are encrypted via a repository specific private key and only the owners are able to encrypt these.

What you have to do, to make this work is the following:

  1. create a pypi account for bhmm (I really encourage to have this)
  2. encrypt username and password according to this guide: http://docs.travis-ci.com/user/encryption-keys/
  3. push releases and be happy.
marscher commented 9 years ago

@franknoe have a look at the registered test package (test pypi server)

https://testpypi.python.org/pypi/bhmm/0.3.0

I think the basic description line is missing.

franknoe commented 9 years ago

Thanks, looks good. What do you mean by the basic description line, i.e. where do I need to add it?

Am 16/06/15 um 15:19 schrieb Martin K. Scherer:

@franknoe https://github.com/franknoe have a look at the registered test package (test pypi server)

https://testpypi.python.org/pypi/bhmm/0.3.0

I think the basic description line is missing.

— Reply to this email directly or view it on GitHub https://github.com/bhmm/bhmm/pull/45#issuecomment-112425369.

Prof. Dr. Frank Noe Head of Computational Molecular Biology group Freie Universitaet Berlin

Phone: (+49) (0)30 838 75354 Web: research.franknoe.de

Mail: Arnimallee 6, 14195 Berlin, Germany

marscher commented 9 years ago

I've already done that, please refresh the testpypi page.

franknoe commented 9 years ago

OK, good, thanks!

This bhmm release is very rudimentary. Some API behavior will definitely change in the next releases. We should also revisit the idea of separating the low-level MSM stuff in pyEMMA into a separate package, because otherwise things become too entangled. But this can be discussed next week in person.

Am 16/06/15 um 15:31 schrieb Martin K. Scherer:

I've already done that, please refresh the testpypi page.

— Reply to this email directly or view it on GitHub https://github.com/bhmm/bhmm/pull/45#issuecomment-112429816.

Prof. Dr. Frank Noe Head of Computational Molecular Biology group Freie Universitaet Berlin

Phone: (+49) (0)30 838 75354 Web: research.franknoe.de

Mail: Arnimallee 6, 14195 Berlin, Germany

marscher commented 9 years ago

@franknoe ping