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bhmm / legacy-bhmm-force-spectroscopy-manuscript

Bayesian hidden Markov models for analysis of single-molecule trajectory data
GNU Lesser General Public License v3.0
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Get rid of p_o_i and p_o functions #7

Open franknoe opened 9 years ago

franknoe commented 9 years ago

I have noticed that I am not using the output_model functions:

bhmm.output_models.discrete.p_o_i bhmm.output_models.discrete.log_p_o_i bhmm.output_models.discrete.p_o bhmm.output_models.discrete.log_p_o bhmm.output_models.gaussian.p_o_i bhmm.output_models.gaussian.log_p_o_i bhmm.output_models.gaussian.p_o bhmm.output_models.gaussian.log_p_o

In favor of a smaller interface I would like to remove them unless you believe we need them.

jchodera commented 9 years ago

Sounds good! Happy to submit a PR for this once we have fixed the failing nosetests.

franknoe commented 9 years ago

I have commented out these functions for now. If we're sure we don't need them, we can remove the code.