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bhofmei / jbplugin-strandedplot

JBrowse plugin that supports positive and negative values at the same coordinate
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Wrong paths in example #1

Open jelleslager opened 6 years ago

jelleslager commented 6 years ago

Hi,

Thanks for this great plugin! This helps me to reduce my number of tracks with nearly 50% :+1:. I got it to work, but was confused at first because the tracks did not appear in the browser. It turns out that the paths that are referred to are not entirely correct:

"StrandedPlotPlugin/Store/SeqFeature/StrandedBigWig" "StrandedPlugin/View/Track/Wiggle/StrandedXYPlot"

The second one has the name of the plugin wrong. And both are in the plugin folder, while Jbrowse searches in the 'src' folder instead. I just copied the plugin files to the 'src' folder and it worked. Not sure if that's the only way to fix it.

Thanks again!

bhofmei commented 6 years ago

Thanks for catching that typo! I’ve fixed it.

In regards to the ‘src’ folder, make sure you specify the location of the plugin in ‘jbrowse.conf’ or ‘jbrowse_conf.json’ (but not both). Once you make that change, clear your browser cache. That should fix the problem.