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bids-apps / DPARSF

Docker version of DPARSF, also deployed at OpenNeuro.org
http://rfmri.org/DPARSF
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Add "analysis level" command line argument #1

Closed chrisgorgo closed 6 years ago

chrisgorgo commented 6 years ago

All BIDS Apps implement the following compulsory command line options:

app_name <input_folder> <output_folder> <analysis_level>

Currently DPARSF is missing support for . Since right now it can only support participant level analyses it can just ignore the thirdpositional command line argument. It needs to be added for consistency across all BIDS Apps. The docker invocation would then look like this:

docker run -i --rm -v /data/MyDataBIDS:/inputs:ro -v /data/DPARSFResults:/outputs dparsfdocker participant /inputs /outputs participant

You can read more about how the role analysis level plays in parallelization here.

Chaogan-Yan commented 6 years ago

Solved.