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bids-apps / MAGeTbrain

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Outputs cleanup #1

Closed chrisgorgo closed 6 years ago

chrisgorgo commented 7 years ago

Currently MAGeTbrain BIDS App creates copies of inputs in the output directory (under input/ subfolder) this is perfectly fine, but could inflate the size of the output package that is archived and needs to be downloaded (in context of integration into a system like OpenNeuro).

One solution would be to remove the intermediate files such as input/ from the output directory as the last command inside the group analysis level.

gdevenyi commented 7 years ago

Will add a cleanup to the end of run.py with an option to disable.

chrisgorgo commented 7 years ago

Awesome!

On Sep 3, 2017 4:28 PM, "Gabriel A. Devenyi" notifications@github.com wrote:

Will add a cleanup to the end of run.py with an option to disable.

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gdevenyi commented 6 years ago

Fixed.