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bids-apps / oppni

runs fast optimization of preprocessing pipelines for BOLD fMRI
Apache License 2.0
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Error in OPPNI #17

Open satrajitgithub opened 6 years ago

satrajitgithub commented 6 years ago

When run on a set of BIDS data, it is throwing the following error

1: Not all subjects/sessions/runs have the same scanning parameters. (code: 39 - INCONSISTENT_PARAMETERS)
/sub-BRAINIX/anat/sub-BRAINIX__run-02_T2w.nii.gz
/sub-BRAINIX/anat/sub-BRAINIX__run-03_T1w.nii.gz
Summary: Available Tasks: Available Modalities:
12 Files, 17.96MB FLAIR
1 - Subject T1w
1 - Session T2w
run_oppni.sh /opt/mcr/v80/ /input /output participant --participant 5Yp0E --run_name linebisection --task_design event
---
Warning: application is running on a locale different from the original platform locale.
WARNING: no contrast is specified. By default, will run all task conditions vs. baseline
WARNING: no analysis specified. Using default model selection
WARNING: the --ndrop field is empty. The default is setting ndrop=0 (no non-equilibrium scans dropped)
WARNING: the --atlasfile field is empty. No spatial normalization is possible
Undefined function or variable "tsvfile_list".
Error in bids_parsejobs (line 113)
Error in run_oppni_bids (line 75)
MATLAB:UndefinedFunction
Unexpected error:
raamana commented 6 years ago

Hi Satra, Can you give it a try on block-design tasks, if you have any?