v1.14.7 npm package broken on bids-examples

[effigies]

The stable tests on the examples repo are failing:

https://github.com/bids-standard/bids-examples/actions/runs/10259615491/job/28384370437?pr=461

The master tests have not failed at all, before or after the release. It seems to be something related to what gets pushed to npm.

The errors are HED-related:

Validating dataset asl001/: Running  bids-validator asl001 -c /home/runner/work/bids-examples/bids-examples/bidsconfig.json --ignoreNiftiHeaders
bids-validator@1.14.7
    1: [ERR] An internal error occurred during HED validation. (code: 106 - HED_INTERNAL_ERROR)

        Summary:                Available Tasks:        Available Modalities: 
        8 Files, 94.63KB                                MRI                   
        1 - Subject                                                           
        1 - Session                                                           

    If you have any questions, please post on https://neurostars.org/tags/bids.

cc @happy5214

[sappelhoff]

We see the exact same issue at https://github.com/mne-tools/mne-bids

cc-ing @VisLab, too

[VisLab]

I was going to running the bids-validator on my local machine to test the issue with the more comprehensive error messages that @happy5214 just pushed up to the hed-validator.

However, when I looked at the newly installed npm bids-validator node-modules there was no @hedvalidator in it. When I tried to link to my local copy of the hed-validator this is verified by the following message:

bids-validator> npm link hed-javascript npm error code E404 npm error 404 Not Found - GET https://registry.npmjs.org/hed-javascript - Not found npm error 404 npm error 404 'hed-javascript@*' is not in this registry.

I can do an npm install hed-validator with no problem so I think this problem might be in the bids-validator release on npm? @rwblair @nellh

[effigies]

@VisLab Should that be npm link hed-validator, not hed-javascript?

[rwblair]

Published a new release, v1.14.8 @VisLab @sappelhoff let me know if this new version fixes the issue.

1.14.7 did have a version of the hed validator bundled in its pack, but hedValidator.bids.buildBidsSchema hedValidator.bids.buildBidsSchemas was undefined. I'm still not sure what went wrong in the build or pack step to cause it.

[happy5214]

1.14.7 did have a version of the hed validator bundled in its pack, but hedValidator.bids.buildBidsSchema was undefined. I'm still not sure what went wrong in the build or pack step to cause it.

I hope that function name is a typo in your post. It should be hedValidator.bids.buildBidsSchemas (i.e. more than one schema).

[rwblair]

@happy5214 It was, sorry about that.

[effigies]

Fixed in 1.14.8: https://github.com/bids-standard/bids-examples/actions/runs/10259615491/job/28415516112

[sappelhoff]

let me know if this new version fixes the issue.

it did, thanks a lot!