.bidsignore format

[tamjidimtiaz]

Hi, my bids directory contains some files that are not compatible with the current bids format which are following:

I want to include thase files in the .bidsignore. I created the .bidsignore file and include the following:

However it didn't work while I was validating again through bids-validator. Can someone give me some guidelines?

[effigies]

I'd get rid of the **/. That's not needed to match, and might not be implemented by the matching library.

[tamjidimtiaz]

I did that as well. But did not work. Do you have any other suggestions?

[effigies]

Could you show a full (text, not screenshot) listing of your dataset, the .bidsignore and the validator output (this could be screenshot, if there's no good way to format the text)?

[tamjidimtiaz]

Is it okay if I share the screenshot of the tree output of the listing of the dataset?

[tamjidimtiaz]

bidstext.txt

[effigies]

Okay, looking at that, you have derivatives directories inside your subject directories, which is likely to be a significant problem. You also use space-<label> in your anatomical filenames, which is not permitted.

What are the validator outputs?

[tamjidimtiaz]

Validator output:

[CPernet]

I have the same issue -- the old validator works but the new one does not like the .bidsignore

[effigies]

Hmm. Could you print out the bytes?

python -c "with open('.bidsignore', 'rb') as fobj: print(fobj.read(50))"

I wonder if you have \r characters that are not being stripped.

[effigies]

Also, can you verify that this occurs with the CLI validator?

deno run --reload -A jsr:@bids/validator $DATASET

[effigies]

Nevermind. Found the bug: #2151

[CPernet]

You guys are too fast ... Thx 🙏