file extension case sentivity

bigbio / nf-workflows

Repository of Nextflow+BioContainers workflows

GNU General Public License v2.0

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Closed sureshhewabi closed 5 years ago

sureshhewabi commented 5 years ago

Currently, our pipeline support only .raw files.

 output:
        file '*.raw' into rawFiles

However there are some raw files with .RAW (or possiblary .Raw) Eg: PXD001439

We should cover all the none case sensitive extensions.

file '.fasta' into myfasta file '.FASTA' into myfasta file '*.fAsTa' into myfasta

sureshhewabi commented 5 years ago

Fixed

PXD001439 successfully completed