Running DeepLC

[ypriverol]

For both analyses we need to run DeepLC, the notebooks:

• Canonical + GCA: https://github.com/bigbio/pgt-pangenome/blob/main/gca_canonical_validation.ipynb
• Noncanonical: ---

These notebooks will release the peptides that will be used to generate the input for DeepLC tool. In this issue will be discussing the results.