spectrumAI into py-pgatk - Githubissues

bigbio / py-pgatk

Python tools for proteogenomics analysis toolkit

Apache License 2.0

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spectrumAI into py-pgatk #77

Closed ypriverol closed 3 months ago

ypriverol commented 3 months ago

This PR includes:

spectrumAI algorithm added.
remove of dependencies version in the requirements and other files.
fix small bug in cbioportal downloader
remove ms2rescore and deeplc from the code until we get better results