bigbio / quantms

Quantitative mass spectrometry workflow.
MIT License
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Multiple search engine filter peptides (Proteogenomics) #198

Closed ypriverol closed 1 year ago

ypriverol commented 2 years ago

Description of feature

In proteogenomics studies we are probably interested only in peptides that have been identified by multiple search engines (more than one search engine). Do we have a way to filter in ConsensusID for peptides identified with both search engines.

jpfeuffer commented 2 years ago

Yes I think it is the -min_support parameter of consensusid

ypriverol commented 2 years ago

@daichengxin can you add the parameter to the module. By default would be 1

daichengxin commented 2 years ago

ok. @ypriverol

ypriverol commented 1 year ago

Is this issue already implemented @daichengxin ?

daichengxin commented 1 year ago

yes.