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bigbio / quantms

Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Isobaric and DIA-LFQ quantification.
https://quantms.org
MIT License
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Do not upload mzmls on GitHub Actions. Instead upload meaningful intermediate data #383

Closed jpfeuffer closed 2 months ago

jpfeuffer commented 3 months ago

Description of the bug

e.g. of the failed step(s)

Command used and terminal output

No response

Relevant files

No response

System information

No response

jpfeuffer commented 3 months ago

Currently the artifact for DIA tests are 6GB :D

jpfeuffer commented 2 months ago

Apparently it is not the mzmls that are so big (we actually do not upload them). It is the csv files from mzmlstatistics (see #390 ) and the fact, that the results from both conda jobs and docker jobs are merged. Maybe we should just upload whenever we are on a docker run to have a single set of test results for each test config.

ypriverol commented 2 months ago

This has been solve temporary in PR #391