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bigbio / sdrf-pipelines

A repository to convert SDRF proteomics files into pipelines config files
Apache License 2.0
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[BUG] openms/unimod.py #130

Closed fabianegli closed 1 year ago

fabianegli commented 2 years ago

UnimodDatabase.modifications is a list but gets treated as if it was a dict.

pylint --disable all --enable E sdrf_pipelines
************* Module sdrf_pipelines.openms.unimod
sdrf_pipelines/openms/unimod.py:109:10: E1101: Instance of 'list' has no 'get' member (no-member)
sdrf_pipelines/openms/unimod.py:119:13: E1101: Instance of 'list' has no 'keys' member (no-member)
sdrf_pipelines/openms/unimod.py:126:10: E1101: Instance of 'list' has no 'get' member (no-member)
sdrf_pipelines/openms/unimod.py:139:10: E1101: Instance of 'list' has no 'get' member (no-member)
ypriverol commented 1 year ago

Already tackle in #148