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bigdatagenomics / avocado

A Variant Caller, Distributed. Apache 2 licensed.
http://bdgenomics.org/projects/avocado/
Apache License 2.0
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Read group dictionary contains multiple samples with identical read group names. #303

Open shukwong opened 6 years ago

shukwong commented 6 years ago

Hi, I am trying to run trioGenotyper but I got the following error. java.lang.IllegalArgumentException: requirement failed: Read group dictionary contains multiple samples with identical read group names. Exception in thread "main" java.lang.IllegalArgumentException: requirement failed: Read group dictionary contains multiple samples with identical read group names.

I understand the issue but I was wondering if there's a easy fix to this problem other than me recoding the readgroups?

Thanks, Wendy