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bigdatagenomics / bdg-formats

Open source formats for scalable genomic processing systems using Avro. Apache 2 licensed.
Apache License 2.0
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AlignmentRecord.attributes should be map<string> #161

Closed heuermh closed 6 years ago

heuermh commented 6 years ago

Not sure why we flatten attributes for AlignmentRecord into a single string, whereas they are stored as a map elsewhere.

  // Remaining optional attributes flattened into a string
  union { null, string } attributes = null;
heuermh commented 6 years ago

Ah right, the flattened values are expanded in AttributeUtils.