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bigdatagenomics / workflows

Toil workflows for bigdatagenomics tools. Apache 2 licensed.
http://www.bdgenomics.org
Apache License 2.0
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Doc commands have incorrect syntax #32

Open heuermh opened 6 years ago

heuermh commented 6 years ago

The doc command blocks aren't copy-and-pasteable due to extraneous $ symbols, e.g.

To run locally, we invoke the following command:

$ bdg-deca \
$   --targets <regions> \
$   --samples <manifest> \
$   --output-dir <path-to-save> \
$   --memory <memory-in-GB> \
$   --run-local \
$   file:<toil-jobstore-path>
fnothaft commented 6 years ago

+1, let's fix that.