This PR introduces several fixes in getOrganismGO:
Remove getOrganismGO function incorrectly intersecting the gene sets with the input genes.
Passes go terms custom genesets to the test geneset module via custom.genesets argument in pgx compute. This will allow correct calculation of raw geneset size.
Fixes implementation of getOrganismGO, which was crashing.
This PR introduces several fixes in
getOrganismGO:Remove
getOrganismGOfunction incorrectly intersecting the gene sets with the input genes.Passes go terms custom genesets to the test geneset module via custom.genesets argument in pgx compute. This will allow correct calculation of raw geneset size.
Fixes implementation of
getOrganismGO, which was crashing.Fixes https://github.com/bigomics/omicsplayground/issues/978