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bigomics / playbase

Core back-end functionality and logic for OmicsPlayground
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fix missing annotation for UNIPROT mouse symbols #148

Closed ivokwee closed 4 hours ago

ivokwee commented 5 hours ago

See issue #149. From CG: "The issue with the missing gene symbols is that we would like to have them in the heat map in a pubication (see sceenshot). Seventy three of the 74 missing gene symbols I was able to retrieve fom UniProt. Is there any way to get them onto the Heat map, or any other Omics Playground illustration or chart?"

Confirmed on mouse UNIPROT data from CG/Tulane. Missing annotation e.g. for probes "Q60870" "P09541" "Q61410" "Q80YV3"

ivokwee commented 4 hours ago

Solution: increase matchratio threshold (should be disable at all??), move ACCNUM before UNIPROT.

Before fix: image

After fix: image