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bihealth / auto-acmg

Automatic classification of sequence variants and CNVs according to ACMG criteria.
GNU General Public License v3.0
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Implement pm1 criteria #111

Closed gromdimon closed 3 months ago

gromdimon commented 3 months ago

Issue:

Description:

codecov[bot] commented 3 months ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 76.73%. Comparing base (959fd14) to head (0eb2504).

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #111 +/- ## ========================================== + Coverage 76.69% 76.73% +0.03% ========================================== Files 23 23 Lines 1802 1805 +3 ========================================== + Hits 1382 1385 +3 Misses 420 420 ``` | [Files](https://app.codecov.io/gh/bihealth/auto-acmg/pull/111?dropdown=coverage&src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth) | Coverage Δ | | |---|---|---| | [src/defs/auto\_acmg.py](https://app.codecov.io/gh/bihealth/auto-acmg/pull/111?src=pr&el=tree&filepath=src%2Fdefs%2Fauto_acmg.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth#diff-c3JjL2RlZnMvYXV0b19hY21nLnB5) | `98.79% <100.00%> (+0.04%)` | :arrow_up: | | [src/defs/seqvar.py](https://app.codecov.io/gh/bihealth/auto-acmg/pull/111?src=pr&el=tree&filepath=src%2Fdefs%2Fseqvar.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth#diff-c3JjL2RlZnMvc2VxdmFyLnB5) | `92.78% <100.00%> (ø)` | |