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bihealth / auto-acmg

Automatic classification of sequence variants and CNVs according to ACMG criteria.
GNU General Public License v3.0
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Added depricatioin note for PP5 and BP6 criteria #114

Closed gromdimon closed 3 months ago

gromdimon commented 3 months ago

Issue:

Description:

codecov[bot] commented 3 months ago

Codecov Report

Attention: Patch coverage is 75.00000% with 1 lines in your changes are missing coverage. Please review.

Project coverage is 70.79%. Comparing base (7910e6b) to head (a358eb6).

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #114 +/- ## ========================================== + Coverage 70.75% 70.79% +0.04% ========================================== Files 27 27 Lines 2055 2058 +3 ========================================== + Hits 1454 1457 +3 Misses 601 601 ``` | [Files](https://app.codecov.io/gh/bihealth/auto-acmg/pull/114?dropdown=coverage&src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth) | Coverage Δ | | |---|---|---| | [src/auto\_acmg.py](https://app.codecov.io/gh/bihealth/auto-acmg/pull/114?src=pr&el=tree&filepath=src%2Fauto_acmg.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth#diff-c3JjL2F1dG9fYWNtZy5weQ==) | `88.60% <100.00%> (+0.44%)` | :arrow_up: | | [src/criteria/auto\_ba1\_bs1\_bs2\_pm2.py](https://app.codecov.io/gh/bihealth/auto-acmg/pull/114?src=pr&el=tree&filepath=src%2Fcriteria%2Fauto_ba1_bs1_bs2_pm2.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth#diff-c3JjL2NyaXRlcmlhL2F1dG9fYmExX2JzMV9iczJfcG0yLnB5) | `23.80% <0.00%> (ø)` | |