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bihealth / auto-acmg

Automatic classification of sequence variants and CNVs according to ACMG criteria.
GNU General Public License v3.0
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Finish autopp3bp4 #126

Closed gromdimon closed 3 months ago

gromdimon commented 3 months ago

Issue:

Description:

codecov[bot] commented 3 months ago

Codecov Report

Attention: Patch coverage is 39.75904% with 50 lines in your changes missing coverage. Please review.

Project coverage is 65.09%. Comparing base (ef8062b) to head (678a4b5).

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #126 +/- ## ========================================== - Coverage 65.42% 65.09% -0.33% ========================================== Files 28 28 Lines 2418 2467 +49 ========================================== + Hits 1582 1606 +24 - Misses 836 861 +25 ``` | [Files](https://app.codecov.io/gh/bihealth/auto-acmg/pull/126?dropdown=coverage&src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth) | Coverage Δ | | |---|---|---| | [src/criteria/auto\_bp7.py](https://app.codecov.io/gh/bihealth/auto-acmg/pull/126?src=pr&el=tree&filepath=src%2Fcriteria%2Fauto_bp7.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth#diff-c3JjL2NyaXRlcmlhL2F1dG9fYnA3LnB5) | `26.66% <ø> (ø)` | | | [src/defs/annonars\_variant.py](https://app.codecov.io/gh/bihealth/auto-acmg/pull/126?src=pr&el=tree&filepath=src%2Fdefs%2Fannonars_variant.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth#diff-c3JjL2RlZnMvYW5ub25hcnNfdmFyaWFudC5weQ==) | `100.00% <100.00%> (ø)` | | | [src/defs/auto\_acmg.py](https://app.codecov.io/gh/bihealth/auto-acmg/pull/126?src=pr&el=tree&filepath=src%2Fdefs%2Fauto_acmg.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth#diff-c3JjL2RlZnMvYXV0b19hY21nLnB5) | `99.31% <100.00%> (+0.02%)` | :arrow_up: | | [src/criteria/auto\_pp3\_bp4.py](https://app.codecov.io/gh/bihealth/auto-acmg/pull/126?src=pr&el=tree&filepath=src%2Fcriteria%2Fauto_pp3_bp4.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth#diff-c3JjL2NyaXRlcmlhL2F1dG9fcHAzX2JwNC5weQ==) | `25.00% <15.25%> (-6.67%)` | :arrow_down: |