search

bihealth / auto-acmg

Automatic classification of sequence variants and CNVs according to ACMG criteria.
GNU General Public License v3.0
4 stars 0 forks source link

Implement caching for API #147

Closed gromdimon closed 1 month ago

gromdimon commented 1 month ago

Issue:

Description: N/A

codecov[bot] commented 1 month ago

Codecov Report

Attention: Patch coverage is 58.82353% with 42 lines in your changes missing coverage. Please review.

Project coverage is 52.62%. Comparing base (30d95a0) to head (2c4975e).

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #147 +/- ## ========================================== + Coverage 52.58% 52.62% +0.03% ========================================== Files 34 35 +1 Lines 3282 3373 +91 ========================================== + Hits 1726 1775 +49 - Misses 1556 1598 +42 ``` | [Files](https://app.codecov.io/gh/bihealth/auto-acmg/pull/147?dropdown=coverage&src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth) | Coverage Δ | | |---|---|---| | [src/core/config.py](https://app.codecov.io/gh/bihealth/auto-acmg/pull/147?src=pr&el=tree&filepath=src%2Fcore%2Fconfig.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth#diff-c3JjL2NvcmUvY29uZmlnLnB5) | `97.14% <100.00%> (+0.17%)` | :arrow_up: | | [src/defs/seqvar.py](https://app.codecov.io/gh/bihealth/auto-acmg/pull/147?src=pr&el=tree&filepath=src%2Fdefs%2Fseqvar.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth#diff-c3JjL2RlZnMvc2VxdmFyLnB5) | `92.78% <100.00%> (ø)` | | | [src/utils.py](https://app.codecov.io/gh/bihealth/auto-acmg/pull/147?src=pr&el=tree&filepath=src%2Futils.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth#diff-c3JjL3V0aWxzLnB5) | `40.97% <ø> (-0.66%)` | :arrow_down: | | [src/api/dotty.py](https://app.codecov.io/gh/bihealth/auto-acmg/pull/147?src=pr&el=tree&filepath=src%2Fapi%2Fdotty.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth#diff-c3JjL2FwaS9kb3R0eS5weQ==) | `77.77% <58.33%> (-10.23%)` | :arrow_down: | | [src/api/mehari.py](https://app.codecov.io/gh/bihealth/auto-acmg/pull/147?src=pr&el=tree&filepath=src%2Fapi%2Fmehari.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth#diff-c3JjL2FwaS9tZWhhcmkucHk=) | `78.68% <54.54%> (-14.00%)` | :arrow_down: | | [src/core/cache.py](https://app.codecov.io/gh/bihealth/auto-acmg/pull/147?src=pr&el=tree&filepath=src%2Fcore%2Fcache.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth#diff-c3JjL2NvcmUvY2FjaGUucHk=) | `62.50% <62.50%> (ø)` | | | [src/api/annonars.py](https://app.codecov.io/gh/bihealth/auto-acmg/pull/147?src=pr&el=tree&filepath=src%2Fapi%2Fannonars.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth#diff-c3JjL2FwaS9hbm5vbmFycy5weQ==) | `71.42% <53.12%> (-12.21%)` | :arrow_down: |