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bihealth / auto-acmg

Automatic classification of sequence variants and CNVs according to ACMG criteria.
GNU General Public License v3.0
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BA1 updates #153

Closed gromdimon closed 1 month ago

gromdimon commented 1 month ago

Issue:

Description:

codecov[bot] commented 1 month ago

Codecov Report

Attention: Patch coverage is 4.76190% with 40 lines in your changes missing coverage. Please review.

Project coverage is 50.21%. Comparing base (a78c9a1) to head (b7f5694).

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #153 +/- ## ========================================== - Coverage 50.38% 50.21% -0.17% ========================================== Files 35 35 Lines 3398 3413 +15 ========================================== + Hits 1712 1714 +2 - Misses 1686 1699 +13 ``` | [Files](https://app.codecov.io/gh/bihealth/auto-acmg/pull/153?dropdown=coverage&src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth) | Coverage Δ | | |---|---|---| | [src/bench/comparison\_v3.py](https://app.codecov.io/gh/bihealth/auto-acmg/pull/153?src=pr&el=tree&filepath=src%2Fbench%2Fcomparison_v3.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth#diff-c3JjL2JlbmNoL2NvbXBhcmlzb25fdjMucHk=) | `0.00% <ø> (ø)` | | | [src/defs/seqvar.py](https://app.codecov.io/gh/bihealth/auto-acmg/pull/153?src=pr&el=tree&filepath=src%2Fdefs%2Fseqvar.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth#diff-c3JjL2RlZnMvc2VxdmFyLnB5) | `92.78% <ø> (ø)` | | | [src/criteria/auto\_pm2\_ba1\_bs1\_bs2.py](https://app.codecov.io/gh/bihealth/auto-acmg/pull/153?src=pr&el=tree&filepath=src%2Fcriteria%2Fauto_pm2_ba1_bs1_bs2.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth#diff-c3JjL2NyaXRlcmlhL2F1dG9fcG0yX2JhMV9iczFfYnMyLnB5) | `13.75% <4.76%> (-0.44%)` | :arrow_down: |