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bihealth
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auto-acmg
Automatic classification of sequence variants and CNVs according to ACMG criteria.
GNU General Public License v3.0
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Change the cache settings
#231
gromdimon
closed
1 month ago
1
Remove unnecessary info fetching
#230
gromdimon
closed
1 month ago
0
Add OpenAPI dump
#229
gromdimon
closed
1 month ago
1
Add OpenAPI schema
#228
gromdimon
closed
1 month ago
0
Deprecate CLI
#227
gromdimon
closed
1 month ago
1
Deprecate CLI
#226
gromdimon
closed
1 month ago
0
Custom microservices urls
#225
gromdimon
closed
1 month ago
1
Add custom urls for reev microservices
#224
gromdimon
closed
1 month ago
1
Fix docker related CI workflows
#223
gromdimon
closed
1 month ago
1
Update usage page in documentation
#222
gromdimon
closed
1 month ago
1
Update comparison_criteria_custom.csv
#221
gromdimon
closed
1 month ago
0
Fix the docker related CI workflows
#220
gromdimon
closed
1 month ago
0
New usage docs
#219
gromdimon
closed
1 month ago
1
Dockerize the application
#218
gromdimon
closed
1 month ago
1
Dockerise the package
#217
gromdimon
closed
1 month ago
0
Provide an API for AutoACMG
#216
gromdimon
closed
1 month ago
1
Update Usage page in documentation
#215
gromdimon
closed
1 month ago
0
Update documentation
#214
gromdimon
closed
1 month ago
1
Add more integration tests
#213
gromdimon
opened
1 month ago
0
Optimize `_check_zyg` method of `AutoPM2BA1BS1BS2`
#212
gromdimon
opened
1 month ago
0
Review skipped tests
#211
gromdimon
closed
1 month ago
0
Fix failing tests in PM2
#210
gromdimon
closed
1 month ago
1
Optimize tests
#209
gromdimon
closed
1 month ago
1
Rename `Notmet` and `Met` prediction statuses
#208
gromdimon
closed
1 month ago
1
Add misZ score evaluation for PP2 and BP1
#207
gromdimon
closed
1 month ago
1
Implement the PVS1 for duplication CNVs
#206
gromdimon
opened
1 month ago
0
Implement duplication - tandem setting to temporary fix the PVS1 criteria for duplication CNVs
#205
gromdimon
closed
1 month ago
1
Provide an API for variant classification
#204
gromdimon
closed
1 month ago
0
Implement lof removes more than 10% of protein for strucvars
#203
gromdimon
closed
1 month ago
1
Implement lof is frequent in population for strucvars
#202
gromdimon
closed
1 month ago
1
Implement crit4prot function for stucvars
#201
gromdimon
closed
1 month ago
1
Document the benchmark
#200
gromdimon
closed
1 month ago
1
Add VCEP Documentation
#199
gromdimon
closed
1 month ago
0
Sort and refine Tests
#198
gromdimon
closed
1 month ago
0
Optimize PP3 and BP4 VCEPs
#197
gromdimon
opened
1 month ago
0
Implement custom `PP3` and `BP4` rules
#196
gromdimon
closed
1 month ago
1
First attempt pp3 and bp4
#195
gromdimon
closed
1 month ago
0
Deprikate "Not applicable" status of the criteria prediction
#194
gromdimon
closed
1 month ago
0
Replace MaxEntScan with SpliceAI
#193
gromdimon
closed
1 month ago
1
Implement VCEPs for `PS1` and `PM5`
#192
gromdimon
closed
1 month ago
1
Implement "In biologically relevant transcript" method for strucvars
#191
gromdimon
closed
2 months ago
1
Implemente undergo_nmd method
#190
gromdimon
closed
2 months ago
1
Implement del_disrupt_rf method
#189
gromdimon
closed
2 months ago
1
Implement full gene deletion method
#188
gromdimon
closed
2 months ago
1
Implement custom `Not applicable` VCEP rules for PVS1
#187
gromdimon
closed
2 months ago
1
Implement pm2, ba1, bs1 rules
#186
gromdimon
closed
2 months ago
1
Add documentation about VCEP rules implementation
#185
gromdimon
closed
1 month ago
0
Add VCEP specifications
#184
gromdimon
closed
2 months ago
1
Reimplement PP2 to use missense z score
#183
gromdimon
closed
1 month ago
1
Implement PP2 and BP1 VCEP rules
#182
gromdimon
closed
2 months ago
1
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