Closed sellth closed 1 year ago
Discussed this with @mbenary. Current templates tumor_normal_dna & *_triplets are unsatisfactory in multiple ways, not the least by relying on external config injection for "triplets": https://github.com/bihealth/cubi-isa-templates/blob/89d1a026b7bbe7e7bfbdf449bd9a41696865a0d9/cubi_isa_templates/__init__.py#L108
We therefore decided to start a better named and hopefully more useful singular cancer template.
Discussed this with @mbenary. Current templates tumor_normal_dna & *_triplets are unsatisfactory in multiple ways, not the least by relying on external config injection for "triplets": https://github.com/bihealth/cubi-isa-templates/blob/89d1a026b7bbe7e7bfbdf449bd9a41696865a0d9/cubi_isa_templates/__init__.py#L108
We therefore decided to start a better named and hopefully more useful singular cancer template.
To do