bihealth / cubi-isa-templates

CUBI ISA-Tab templates
MIT License
2 stars 4 forks source link

Add new isatab template 'cancer' #20

Closed sellth closed 1 year ago

sellth commented 1 year ago

Discussed this with @mbenary. Current templates tumor_normal_dna & *_triplets are unsatisfactory in multiple ways, not the least by relying on external config injection for "triplets": https://github.com/bihealth/cubi-isa-templates/blob/89d1a026b7bbe7e7bfbdf449bd9a41696865a0d9/cubi_isa_templates/__init__.py#L108

We therefore decided to start a better named and hopefully more useful singular cancer template.

To do