Add parameter to keep even qc failed reads

bihealth / digestiflow-demux

:spaghetti: Digestiflow Demultiplexing Tool

MIT License

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Closed holtgrewe closed 5 years ago

holtgrewe commented 5 years ago

Important for tutorial where TTTTTTTTT would be filtered as it's an artifact...

holtgrewe commented 5 years ago

--with-failed-reads for bcl2fastq2

messersc commented 5 years ago

Should that also be a field in digestiflow-server? Or just a parameter for demux?

holtgrewe commented 5 years ago

Only cubi-demux as it's only useful for the tutorial ;)