Open eudesbarbosa opened 3 years ago
Issue Conda env takes forever to install - maybe revisit if all requirements are really necessary.
Proposed solution A good chuck of entries in conda_env.yaml are associated to Bioconductor/R, perhaps specific packages can be installed as they are required for specific templates. Example: https://vbaliga.github.io/verify-that-r-packages-are-installed-and-loaded/
conda_env.yaml
Ensure that you're using mamba. Current Snakemake versions actually use mamba by default now... it's so much faster.
mamba
Issue Conda env takes forever to install - maybe revisit if all requirements are really necessary.
Proposed solution A good chuck of entries in
conda_env.yaml
are associated to Bioconductor/R, perhaps specific packages can be installed as they are required for specific templates. Example: https://vbaliga.github.io/verify-that-r-packages-are-installed-and-loaded/