bihealth / snappy-pipeline

SNAPPY Nucleic Acid Processing in Python
MIT License
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Resolve Codacy errors #6

Open holtgrewe opened 3 years ago

holtgrewe commented 3 years ago

After some configuration, the Codacy issues appear to be at least somewhat useable. However, there are 2k+ such issues and adressing them will be a major effort. We should distribute files/paths by person and go through them one-by-one. Certain classes can be adressed automatically, certain classes have to be adressed in a proper way and certain classes should be ignored (one-by-one or the whole pattern).

auto cleanup

manual no-brainer cleanup

one-by-one treatment

holtgrewe commented 3 years ago

Trailing whitespace can be removed with Perl, unused import with autoflakes. See #7.