Closed niemasd closed 6 years ago
I installed pgltools as instructed in the README:
pip install PyGLtools
I can import the PyGLtools package within Python like in the example in the README:
import PyGLtools as pygl
However, in the Methods section, there are references to a pgltools executable, e.g.:
pgltools
pgltools formatbedpe myFile.bedpe > output.pgl pgltools formatTripSparse [options] pgltools formatTripSparse -ts myFile.tripSparse -an myFile.annotations > output.pgl pgltools browser myFile.pgl > output.bed etc.
However, I get bash: pgltools: command not found when I try to run the pgltools command. How do I get the pgltools executable?
bash: pgltools: command not found
Woops, didn't read the beginning of the instructions. My bad!
I installed pgltools as instructed in the README:
I can import the PyGLtools package within Python like in the example in the README:
However, in the Methods section, there are references to a
pgltools
executable, e.g.:However, I get
bash: pgltools: command not found
when I try to run thepgltools
command. How do I get thepgltools
executable?