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binbinbinv / GATSol

GATSol, an enhanced predictor of protein solubility through the synergy of 3D structure information and large language modeling
MIT License
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FileNotFoundError: [Errno 2] No such file or directory: './NEED_to_PREPARE/pkl/O13539.pkl' #3

Open Marshall-lee0815 opened 2 months ago

Marshall-lee0815 commented 2 months ago

the first “Could not find conda environment: pyg You can list all discoverable environments with conda info --envs. “，It should be that you've added your own environment name to the code.The second one, there should be a PKL file in the predict file, where does this file come from, is it prepared in advance or utilized by which code?(请问如何解决相关的pkl文件缺失的问题)

Marshall-lee0815 commented 2 months ago

FileNotFoundError: [Errno 2] No such file or directory: './NEED_to_PREPARE/pkl/O13539.pkl'

binbinbinv commented 2 months ago

the first “Could not find conda environment: pyg You can list all discoverable environments with conda info --envs. “，It should be that you've added your own environment name to the code.The second one, there should be a PKL file in the predict file, where does this file come from, is it prepared in advance or utilized by which code?(请问如何解决相关的pkl文件缺失的问题)

  1. It may be solved after I delete the step of activating the env of pyg in the script - GATSol/tools/pdb_to_cm/pdb_to_cm.sh.
  2. Same issue as: https://github.com/binbinbinv/GATSol/issues/1#issuecomment-2275079563. And it may take some time to solve this problem.
Marshall-lee0815 commented 2 months ago

en

我是否能获得一个你的私人邮箱来交流解决这个问题和此方向的内容，同样来自一个研究生