Originally posted by **rjkowalski** May 5, 2023
I have the v1.0.3 3D Slicer extension installed in 3D Slicer v5.2.2 running on macOS. When I load up a 3D volume or 2D slice and add a few prompts, the running SAM server throws the following error:
File "/Users/my_user/GitHub/samm/samm-python-terminal/sam_server.py", line 273, in main
srv.infer_image( \
File "/Users/my_user/GitHub/samm/samm-python-terminal/sam_server.py", line 184, in infer_image
self.load_feature(os.path.join(self.workspace, "segmented_images", "segmented_" + image_name + ".pkl"))
File "/Users/my_user/GitHub/samm/samm-python-terminal/sam_server.py", line 166, in load_feature
with open(self.feature_path, 'rb') as f:
FileNotFoundError: [Errno 2] No such file or directory: '/Users/my_userGitHub/samm/samm-python-terminal/samm-workspace/segmented_images/segmented_slc24.pkl'
This error repeats numerous times when i add the first prompt point. I had a look in the samm folder: samm -- samm-python-terminal -- samm-workspace and only have the following files:
config.yaml
imgsize
imgsize_input_size
imgsize_original_size
mask.memmap
sam_vit_h_4b8939.pth
slices/
The slices directory is empty. Any suggestions or ideas on what is happening here?
Thanks!
Jeff
Discussed in https://github.com/bingogome/samm/discussions/30