find_genes dont report gene sequences.

bingxiao / biopieces

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find_genes dont report gene sequences. #35

Open GoogleCodeExporter opened 9 years ago

GoogleCodeExporter commented 9 years ago

What steps will reproduce the problem?
1. read_fasta -i genome.fna | find_genes
2. missing SEQ: for all found genes

The problem is due to prodigal removing sequence from the GenBank output of 
Prodigal.

Original issue reported on code.google.com by martinah...@gmail.com on 10 Jul 2012 at 9:18