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bio-miga
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miga
MiGA: Microbial Genomes Atlas
Artistic License 2.0
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Rebase branch
#127
lmrodriguezr
closed
3 years ago
0
Doctor thr
#126
lmrodriguezr
closed
3 years ago
0
Scythe no longer in conda
#125
lmrodriguezr
closed
3 years ago
10
Part of MiGA is not working (aai and ani)
#124
BJCampbelllab
closed
3 years ago
5
Fastaai
#123
lmrodriguezr
closed
3 years ago
1
Add FastAAI submodule
#122
lmrodriguezr
closed
3 years ago
0
Options
#121
lmrodriguezr
closed
3 years ago
0
Rdp classifier
#120
lmrodriguezr
closed
3 years ago
0
Update to v0.7.21.0
#119
lmrodriguezr
closed
3 years ago
0
Update to v0.7.20.1
#118
lmrodriguezr
closed
3 years ago
0
Project-wide results should update automatically
#116
lmrodriguezr
closed
3 years ago
0
slow mode dereplicate v0.7 (blastp, blastn) runtime error for large genome collection (~4000)
#115
jianshu93
closed
1 year ago
1
Bidirectional comparisons not being saved
#114
lmrodriguezr
closed
4 years ago
0
Daemon interactive
#113
lmrodriguezr
closed
4 years ago
0
LoadError with 'miga init' during install from source
#112
ZoeHansen
closed
4 years ago
6
Recent changes imported
#111
lmrodriguezr
closed
4 years ago
0
Import recent changes
#110
lmrodriguezr
closed
4 years ago
0
Cleanup in miga get_db
#109
lmrodriguezr
opened
4 years ago
0
Add ancillary files to miga files
#108
lmrodriguezr
opened
4 years ago
0
Use FaQCs as the default trimming/clipping method
#107
lmrodriguezr
closed
3 years ago
0
Daemon takes too long recalculating status
#106
lmrodriguezr
opened
4 years ago
0
Browse action
#105
lmrodriguezr
closed
4 years ago
0
Automatically filtering out low-quality genomes
#104
lmrodriguezr
closed
4 years ago
0
'CondaVerificationError' and 'ClobberError'
#103
chencan-cc
closed
4 years ago
1
Remove "results" from results json
#102
lmrodriguezr
closed
4 years ago
0
diamond + fastani option error (same input successful for default option)
#101
jianshu93
closed
3 years ago
3
Calculate distances between user genomes and find different genes
#100
Tato14
closed
4 years ago
4
Make --fast settings the default
#99
jianshu93
closed
3 years ago
1
Project processing should call miga doctor by default
#98
lmrodriguezr
closed
4 years ago
0
miga doctor should look for unregistered files
#97
lmrodriguezr
opened
4 years ago
0
conda envirenment containing all prerequisits
#96
uloeber
closed
4 years ago
12
miga get_db fails in older Ruby versions
#95
lmrodriguezr
closed
4 years ago
0
Daemon violates max jobs
#94
lmrodriguezr
closed
4 years ago
0
MIGA Installation error
#93
Tato14
closed
4 years ago
2
Remove plugins
#92
lmrodriguezr
closed
4 years ago
0
Ssh
#91
lmrodriguezr
closed
4 years ago
0
search function limited results
#90
thomasvangurp
opened
4 years ago
1
Remote execution (SSH)
#88
lmrodriguezr
closed
4 years ago
0
adding a query dataset does not work
#87
thomasvangurp
closed
4 years ago
1
Workflows
#86
lmrodriguezr
closed
4 years ago
0
miga doctor should check for unzipped protein files
#85
lmrodriguezr
closed
4 years ago
0
Basic workflows required
#84
lmrodriguezr
closed
4 years ago
0
MiGa online is down
#83
magnuson1
closed
5 years ago
1
Cleanup tax_test
#82
lmrodriguezr
closed
5 years ago
0
stats doesn't load ~/.miga_rc on system calls
#81
lmrodriguezr
closed
5 years ago
0
CLI API
#80
lmrodriguezr
closed
5 years ago
0
CLI scripts are ad hoc, should be packaged
#79
lmrodriguezr
closed
5 years ago
1
ANI medoids should be flagged
#78
lmrodriguezr
closed
4 years ago
1
Sort ANI clusters by medoid ranking
#77
lmrodriguezr
closed
4 years ago
0
miga doctor should check for inactive datasets
#76
lmrodriguezr
opened
5 years ago
0
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