AttributeError: 'module' object has no attribute 'select'

bio-ontology-research-group / deepgo

Function prediction using a deep ontology-aware classifier

http://deepgo.bio2vec.net

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AttributeError: 'module' object has no attribute 'select' #7

Closed cartal closed 5 years ago

cartal commented 6 years ago

Hi,

I can't get around this error. I have tried to solve it by upgrading tf version but it is not working with the newest versions of tf.

Any idea of a workaround?

Regards

coolmaksat commented 6 years ago

Hi, You should probably downgrade tf version, look at requirements.txt

cartal commented 6 years ago

Hi again,

I have spend this time trying to solve the installation problem. And I thought I did, but I get this error (See attachment).

Also, I must be missing something, but I don't find a sequential set of steps to perform the analysis. Which script do I have to use to train the model and how. Is this somewhere?

screen shot 2018-05-22 at 13 30 30

coolmaksat commented 6 years ago

Hi, the script you are using is the one which is used for training and testing the model (which use only protein sequence). This file has training data http://deepgo.bio2vec.net/data/train.tar.gz