The new version takes forever!!

[pablopareja]

I'm performing the first tests to import Bio4j using titan 0.5.1 and at least as it is right now just takes forever to import GO ! :fearful: :cold_sweat:

Importing Gene Ontology was taking around 1 minute with the previous version and surprisingly would take now ~ 1 hour !

Any ideas why?

I assume we're not properly setting up some configuration parameters because otherwise this is slow as hell....! :fire:

[eparejatobes]

no idea :-|

[eparejatobes]

@pablopareja did you run the EnzymeDB test?

[eparejatobes]

I am looking at this

[pablopareja]

yeah, the thing is that in the case of EnzymeDB there's no index look up in the whole process so the time spent is equivalent to that when using the older version

[eparejatobes]

It looks like this is scanning the whole thing right now, indexes are not being picked up. Let me check that this is exactly what's going on.

[eparejatobes]

Yes, that's it. Let's see what else do we need here

[eparejatobes]

I mean for indexes being used.

[eparejatobes]

@pablopareja fixed! I'll push in a couple of minutes. Anyway labels and indexes are pretty scary, read this:

• https://groups.google.com/forum/#!topic/aureliusgraphs/f2HX9hUvBuA

[eparejatobes]

[info] GOTestSuite:
[info] - Importing GO
[info] Run completed in 1 minute, 35 seconds.

[eparejatobes]

!!!

[pablopareja]

cool! :smiley:

So they're becoming Neo4j-ish and Neo4j is sort of going into the right direction ?? things are weird... :confused:

[eparejatobes]

@pablopareja btw this was slower before right? I mean GO took several minutes with the previous version IIRC

[pablopareja]

Not really: 1m 14s

[eparejatobes]

OK fine, then things are at least the same as before

[eparejatobes]

closing, will update to the new angulillos in a diff branch