bioAI-Oslo / Spikeometric

Spiking Neural Network Simulator based on Generalized Linear Models
GNU General Public License v3.0
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Testing #3

Closed JakobSonstebo closed 1 year ago

JakobSonstebo commented 1 year ago

Implemented a model of spiking neurons using a Graph Neural Network with tunable parameters. The model can be simulated over time to give training data for the inverse problem. The framework allows for both randomly drawn and custom initial connectivity. There is also support for adding external stimulation, either as a custom callable or using the RegularStimulation, SinStimulation or PoissonStimulation classes. These classes have parameters that can be tuned to increase or decrease activity in the network. There is also dependency management through conda and poetry and extensive testing of all functions and classes in the package.

lepmik commented 1 year ago

When confilicts are resolved I can merge