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bioDS / beast-phylonco

A BEAST2 package for single-cell cancer evolution
GNU Lesser General Public License v2.1
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Fixes TreeLikelihoodWithError to use java implementation #13

Closed kche309 closed 2 years ago

kche309 commented 2 years ago

This pull request includes:

  1. Improvements to readme sectioning and command line instructions
  2. Fixes likelihood error classes to use Java instead of Beagle as the default implementation

(2) should fix the Beagle error message from https://github.com/bioDS/beast-phylonco/issues/12#issuecomment-1042485610