MOFAobject.trained <- run_mofa(MOFAobject, use_basilisk = TRUE,
outfile = "/space/multilayer_prediction_model/results/heena/mofaTrained-20230411-SBStop_22RNASeq.hdf5")
Connecting to the mofapy2 package using basilisk.
Set 'use_basilisk' to FALSE if you prefer to manually set the python binary using 'reticulate'.
sh: 4: /home/heena/anaconda3/envs/blm_heena/etc/conda/deactivate.d/deactivate-r-base.sh: [[: not found
'/home/heena/.cache/R/basilisk/1.6.0/0/bin/conda' 'create' '--yes' '--prefix' '/home/heena/.cache/R/basilisk/1.6.0/MOFA2/1.4.0/mofa_env' 'python=3.7.7' '--quiet' '-c' 'conda-forge'
Collecting package metadata (current_repodata.json): ...working... done
Solving environment: ...working... failed with repodata from current_repodata.json, will retry with next repodata source.
Collecting package metadata (repodata.json): ...working... done
Found conflicts! Looking for incompatible packages.
This can take several minutes. Press CTRL-C to abort.
failed
UnsatisfiableError: The following specifications were found to be incompatible with each other:
Output in format: Requested package -> Available versions
Package glibc conflicts for:
@/linux-64::glibc==2.35=0
python=3.7.7 -> libgcc-ng[version='>=7.3.0'] -> __glibc[version='>=2.17']
Note that strict channel priority may have removed packages required for satisfiability.
Found conflicts! Looking for incompatible packages. This can take several minutes. Press CTRL-C to abort. failed
UnsatisfiableError: The following specifications were found to be incompatible with each other:
Output in format: Requested package -> Available versions
Package glibc conflicts for: @/linux-64::glibc==2.35=0 python=3.7.7 -> libgcc-ng[version='>=7.3.0'] -> __glibc[version='>=2.17'] Note that strict channel priority may have removed packages required for satisfiability.
Error: Error creating conda environment '/home/heena/.cache/R/basilisk/1.6.0/MOFA2/1.4.0/mofa_env' [exit code 1]
Do you have any idea what causes this error?
use_basilisk = FALSE - also have same error: