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bioFAM / mofapy2

Multi-omics factor analysis v2
https://biofam.github.io/MOFA2/
GNU Lesser General Public License v3.0
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Scipy test failure #33

Closed ilan-gold closed 1 month ago

ilan-gold commented 1 month ago

https://github.com/scverse/integration-testing/actions/runs/11384930378/job/31673688338?pr=1

gtca commented 1 month ago

There is no scipy.shape in the codebase anymore. https://github.com/bioFAM/mofapy2/blob/275bfe040e5032821a0bff06a52eb0daa602b2a6/mofapy2/core/distributions/basic_distributions.py#L69

ilan-gold commented 1 month ago

Then it seems like a uv dependency installer issue. People should then upper pin mofapy2 if they use uv in a constraints file