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bioatlas / dyntaxa

R package providing access to Dyntaxa - a database of Swedish taxonomic names
GNU Affero General Public License v3.0
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Add data for reproductiveStatus, establishmentMeans and reproductiveCondition #1

Open mskyttner opened 5 years ago

mskyttner commented 5 years ago

A taxon information page at for example https://www.dyntaxa.se/Taxon/Info/223657?changeRoot=True includes data for establishment means and reproductive conditions as well as the threat status for the taxon.

This data is part of Dyntaxa according to the About text at https://www.slu.se/dyntaxa/ which writes that the Dyntaxa data includes this information. This is not included in the darwin core archive export, though.

Perhaps some of this data could be mapped to the Distribution extension - https://tools.gbif.org/dwca-validator/extension.do?id=gbif:Distribution - for establishmentMeans and threatStatus?

Perhaps (parts of?) the data that is labelled "svensk förekomst" could be mapped to http://rs.tdwg.org/dwc/terms/#dwc:reproductiveCondition?

umeldt commented 5 years ago

The data labelled "svensk förekomst" can probably be used to infer both an occurrenceStatus and reproductiveCondition (some information will probably be lost in the mapping). http://rs.tdwg.org/dwc/terms/#dwc:occurrenceStatus

Here's a suggested mapping to occurrenceStatus from the work I did on the red list:

Bofast och reproducerande: present Ej längre bofast, ej tillfälligt förekommande: absent Ej längre bofast, nu endast tillfälligt förekommande: irregular Möjligen nationellt utdöd: absent Regelbunden förekomst, ej reproducerande: present Ej bofast men tillfälligt reproducerande: irregular Osäkert om påträffad: doubtful Tillfällig förekomst (alt. kvarstående): irregular Påträffad, okänt om reproducerande: present Ej påträffad: absent

There might be some more unhandled values, but this covers all of the ones I found in the red list data, at least...

mskyttner commented 5 years ago

Regarding establishmentMeans, please see validation report here: #3