biobakery / biobakery_workflows

bioBakery workflows is a collection of workflows and tasks for executing common microbial community analyses using standardized, validated tools and parameters.
http://huttenhower.sph.harvard.edu/biobakery_workflows
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Errors:"biobakery_workflows_databases --install isolate_assembly" #9

Open LiZhihua1982 opened 3 years ago

LiZhihua1982 commented 3 years ago

root@ce16e5f0ff77:/# biobakery_workflows_databases --install isolate_assembly Downloading eggnog mapper databases Traceback (most recent call last): File "/usr/local/bin/biobakery_workflows_databases", line 11, in sys.exit(main()) File "/usr/local/lib/python3.6/dist-packages/biobakery_workflows/biobakery_workflows_databases.py", line 238, in main run_command(["download_eggnog_data.py","--data_dir",eggnog_install_path,"-y"]) File "/usr/local/lib/python3.6/dist-packages/biobakery_workflows/biobakery_workflows_databases.py", line 73, in run_command id=subprocess.check_call(command, shell=shell) File "/usr/lib/python3.6/subprocess.py", line 306, in check_call retcode = call(*popenargs, *kwargs) File "/usr/lib/python3.6/subprocess.py", line 287, in call with Popen(popenargs, **kwargs) as p: File "/usr/lib/python3.6/subprocess.py", line 729, in init restore_signals, start_new_session) File "/usr/lib/python3.6/subprocess.py", line 1364, in _execute_child raise child_exception_type(errno_num, err_msg, err_filename) FileNotFoundError: [Errno 2] No such file or directory: 'download_eggnog_data.py': 'download_eggnog_data.py'