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biobakery / humann

HUMAnN is the next generation of HUMAnN 1.0 (HMP Unified Metabolic Analysis Network).
http://huttenhower.sph.harvard.edu/humann
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EggNOG IDs #56

Closed FelipeMSD closed 1 year ago

FelipeMSD commented 1 year ago

Dear all,

After regrouping Uniref90 mapped protein family into EggNOG functions I was able to map a function with ID "ENOG41069WJ", however, it does not have a name on map_eggnog_name.txt.gz and also is not available on http://eggnog5.embl.de/#/app/home, even though it is assigned to many Uniref90 proteins on map_eggnog_uniref90.txt.gz. How did you get EggNOG IDs like this one (that are not "COG") and where can I find a definition of their associated biological function?

Another question: Can the same Uniref90 protein family be associated with multiple EggNOG functions after regrouping? If yes, does it not impact the read counts calculation?

Thank you very much for your support, Felipe

github-actions[bot] commented 1 year ago

Thank you for creating this issue. We currently field issues through our bioBakery Discourse Support Forum. If you would please post the issue to discourse we would be happy to sync up with you to get it resolved.