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biobee / standardanalysis

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Problem with Input data #2

Closed DDM203 closed 5 months ago

DDM203 commented 5 months ago

Hi Derek, I could install everything. I follow the instruction, but am stuck here "ps <- import_data(biom_file_name, mapping_file_name)". It shows: Error in import_data(biom_file_name, mapping_file_name) : could not find function "import_data"

I load vignette('standard-analysis-tutorial', package = 'standardanalysis'). It did not give any error. I also define input_directory, biofilm_file_name, mapping_file_name (using the test files).

What can be the problem?

plasde commented 5 months ago

Hi, Did you begin the analysis with library("standardanalysis") to also load the package?