biobricks-ai biobricks-r issues

biobricks-ai / biobricks-r

R package for biobricks

https://biobricks.ai

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Update BioBricks to Handle Multiple Data Asset Formats

#27 tomlue opened 1 year ago
0
remotes install biobricks via remotes

#26 kesselhwvan opened 1 year ago
2
if you install biobricks-r it needs a reticualte environment, but that reticulate environment won't have biobricks, so we need a pip install biobricks step.

#25 tomlue opened 1 year ago
0
add tests after environmental overrides are added to biobricks

#24 tomlue opened 1 year ago
0
content hash brickrefs?

#23 tomlue opened 1 year ago
0
custom error when the user doesn't own BBLIB

#22 tomlue closed 1 year ago
0
confusing error on `brick_load` nonexistent brick

#21 tomlue opened 2 years ago
0
move 'data' directory to 'brick' directory for all legacy bricks.

#20 tomlue opened 2 years ago
0
Biobricks needs Docker as a dependency

#19 Maddocent opened 2 years ago
0
Add progress bar to function `brick_pull()`

#18 Maddocent opened 2 years ago
0
installation fails with suggested commands

#17 ReneGeci closed 2 years ago
5
Fix functions names bricks_

#16 JJSirius closed 2 years ago
0
make brick_load_arrow and _sqlite private and only export just brick_load

#15 tomlue closed 2 years ago
1
demo bricks

#13 tomlue closed 2 years ago
3
add codecov and get to 100% coverage

#12 tomlue closed 2 years ago
0
Make a github action for running tests

#11 tomlue closed 2 years ago
1
use skip_on_ci

#10 tomlue closed 2 years ago
1
add remove.biobricks function

#9 tomlue closed 2 years ago
0
make a test for bricks with dependencies

#8 tomlue closed 2 years ago
1
better error message when remote doesn't exist

#7 tomlue closed 2 years ago
0
make an skipped test for the docker env

#6 tomlue closed 2 years ago
0
make the install-and-bake tests actually work

#5 tomlue closed 2 years ago
0
add a test for update_brick

#4 tomlue closed 2 years ago
0
when installing an already installed brick suggest update instead?

#3 tomlue closed 2 years ago
0
`install` needs cleaning. Maybe use brick.install instead?

#2 tomlue closed 2 years ago
0
improve loading. How do we handle sqlite? other loading functions?

#1 tomlue closed 2 years ago
0