ypriverol
commented
6 years ago I will check this week, this issue.
On 27/05/2018 18:46, sneumann wrote:
Hi, if I search for the MTBLS2 dataset like https://datamed.org/search.php?query=mtbls2&searchtype=data I get to the dataMed page https://datamed.org/display-item.php?repository=0044&id=5841d97e5152c649505fea65&query=mtbls2 which is in turn coming from omicDI where @ypriverol https://github.com/ypriverol is involved. DataMed correctly links to landingpage: https://www.omicsdi.org/dataset/metabolights_dataset/MTBLS2 but the accessURL: www.omicsdi.org/ws/dataset/arrayexpress-repository/MTBLS2.json http://www.omicsdi.org/ws/dataset/arrayexpress-repository/MTBLS2.json incorretly points to arrayexpress and gives a 404 at omicsDI. I am unsure whether omicsDI or biocaddie gets this wrong somewhere.
The primary data source is http://www.ebi.ac.uk/metabolights/MTBLS2 @khaug https://github.com/khaug would also be happy of you could fix this and get MetaboLights into biocaddie proper ;-)
Yours, Steffen
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-- Yasset Perez-Riverol PhD. Project Leader: PRIDE Resources Proteomics Services Team, PRIDE Group European Bioinformatics Institute (EMBL-EBI) Wellcome Trust Genome Campus Hinxton Cambridge CB10 1SD United Kingdom Twitter: @ypriverol
Hi, if I search for the MTBLS2 dataset like https://datamed.org/search.php?query=mtbls2&searchtype=data I get to the dataMed page https://datamed.org/display-item.php?repository=0044&id=5841d97e5152c649505fea65&query=mtbls2 which is in turn coming from omicDI where @ypriverol is involved. DataMed correctly links to landingpage: https://www.omicsdi.org/dataset/metabolights_dataset/MTBLS2 but the accessURL: www.omicsdi.org/ws/dataset/arrayexpress-repository/MTBLS2.json incorretly points to arrayexpress and gives a 404 at omicsDI. I am unsure whether omicsDI or biocaddie gets this wrong somewhere.
The primary data source is http://www.ebi.ac.uk/metabolights/MTBLS2 @khaug would also be happy of you could fix this and get MetaboLights into biocaddie proper ;-)
Yours, Steffen