biocatiit / musclex

Muscle X program suite is a collection of programs intended to assist with analyzing diffraction X-ray images.
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qm not working #12

Closed karen33 closed 6 years ago

karen33 commented 6 years ago

the following error happened when I do the set manual center and rotation. \ Please report the problem with error message below and the input image

Image : pwmhc2day2-3.tif

Error : <type 'exceptions.IOError'>

Traceback (most recent call last): File "/usr/local/lib/python2.7/dist-packages/musclex/ui/QuadrantFoldingGUI.py", line 1764, in processImage self.quadFold.process(flags) File "/usr/local/lib/python2.7/dist-packages/musclex/modules/QuadrantFolder.py", line 133, in process self.cacheInfo() File "/usr/local/lib/python2.7/dist-packages/musclex/modules/QuadrantFolder.py", line 85, in cacheInfo pickle.dump(self.info, open(cache_file, "wb")) IOError: [Errno 13] Permission denied: '/home/karen/20140405Hsu/pwmhc2/pwmhc2_tifave/qf_cache/pwmhc2day2-3.tif.info'

another error message when I did set manual rotation.

Please report the problem with error message below and the input image

Image : pwmhc2day2-3.tif

Error : <type 'exceptions.IOError'>

Traceback (most recent call last): File "/usr/local/lib/python2.7/dist-packages/musclex/ui/QuadrantFoldingGUI.py", line 1764, in processImage self.quadFold.process(flags) File "/usr/local/lib/python2.7/dist-packages/musclex/modules/QuadrantFolder.py", line 133, in process self.cacheInfo() File "/usr/local/lib/python2.7/dist-packages/musclex/modules/QuadrantFolder.py", line 85, in cacheInfo pickle.dump(self.info, open(cache_file, "wb")) IOError: [Errno 13] Permission denied: '/home/karen/20140405Hsu/pwmhc2/pwmhc2_tifave/qf_cache/pwmhc2day2-3.tif.info'

I updated musclex today in 2/23/2018 and the software should be new. I attached the image I used for analyzing. It's a tif file. not sure if that cause problem.

pwmhc2day2-4.zip

karen33 commented 6 years ago

I found out the problem might happened from my image were from merging images. I will redo the image merge.

jiranun commented 6 years ago

Hi Karen,

It seems like the problem was the program couldn’t read cache file because permission denied. If it happens again, please delete folder qf_cache under your data folder, the re-process the image again.

Let me know if the problem still exists.

Thanks