search

biocommons / uta

Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; available as a docker image
Apache License 2.0
62 stars 26 forks source link

ncbi-parse-gff error: #225

Closed ypchan closed 7 months ago

ypchan commented 4 years ago

image Dear sir,

Your script ncbi-parse-gff doesn't work. the error raise at line 262. You should replace ti.ac with ti['ac'].

Thank for your great work.

reece commented 4 years ago

This problem is actually somewhat deeper. The problem is that the iterators that worked with Python 2 don't work with Python 3. The changes themselves are fairly simple, but I don't have time to test them. I may have additional UTA work in the near future, including reloading, so this change will come then.

github-actions[bot] commented 11 months ago

This issue is stale because it has been open 30 days with no activity. Remove stale label or comment or this will be closed in 7 days.

github-actions[bot] commented 11 months ago

This issue was closed because it has been stalled for 7 days with no activity.

github-actions[bot] commented 8 months ago

This issue is stale because it has been open 90 days with no activity. Remove stale label or comment or this will be closed in 7 days.

github-actions[bot] commented 7 months ago

This issue was closed because it has been stalled for 7 days with no activity.